STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD1BTB domain containing 1. (486 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
   
 0.830
COPS3
COP9 signalosome subunit 3.
    
 0.801
COPS5
COP9 signalosome subunit 5.
    
  0.799
COPS6
COP9 signalosome subunit 6.
    
  0.787
COPS2
COP9 signalosome subunit 2.
   
  0.783
LRR1
Leucine rich repeat protein 1.
    
 0.780
COPS8
COP9 signalosome subunit 8.
    
  0.728
GPR152
G protein-coupled receptor 152.
     
 0.724
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
      
 0.721
CABP4
Calcium binding protein 4.
      
 0.718
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.