STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF182Ring finger protein 182. (247 aa)    
Predicted Functional Partners:
TBC1D30
TBC1 domain family member 30.
      
 0.758
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.754
NRIP3
Nuclear receptor interacting protein 3.
   
  
 0.748
OCIAD2
OCIA domain containing 2.
      
 0.726
ARHGAP12
Rho GTPase activating protein 12.
      
 0.686
SLC39A6
Solute carrier family 39 member 6.
      
 0.677
ENSCWAP00000007023
annotation not available
    
 
 0.662
ENSCWAP00000005210
annotation not available
    
 
 0.651
RNF186
Ring finger protein 186.
      
 0.629
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.600
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.