STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN3Matrilin 3. (488 aa)    
Predicted Functional Partners:
COMP
Cartilage oligomeric matrix protein.
    
 0.984
LUM
Lumican.
   
 
 0.839
ACAN
Aggrecan.
   
 0.816
CRELD2
Cysteine rich with EGF like domains 2.
    
 
 0.780
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
COL9A3
Collagen type IX alpha 3 chain.
   
 
 0.683
COL9A1
Collagen type IX alpha 1 chain.
   
 
 0.670
MATN1
Matrilin 1.
   
 
0.666
TGFB1
Transforming growth factor beta 1.
    
 0.664
ARID4B
AT-rich interaction domain 4B.
    
 0.664
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.