STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLRN1Clarin 1. (232 aa)    
Predicted Functional Partners:
ZP4
Zona pellucida glycoprotein 4.
      
 0.762
USH1G
USH1 protein network component sans.
      
 0.758
CIB2
Calcium and integrin binding family member 2.
      
 0.741
USH1C
USH1 protein network component harmonin.
      
 0.741
WHRN
Whirlin.
      
 0.728
CDH23
Cadherin related 23.
   
  
 0.696
USH2A
Usherin.
      
 0.683
PDZD7
PDZ domain containing 7.
      
 0.683
PCDH15
Protocadherin related 15.
      
 0.683
MYO7A
Myosin VIIA.
      
 0.670
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.