STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDF1Endothelial differentiation related factor 1. (148 aa)    
Predicted Functional Partners:
ENSCWAP00000011123
annotation not available
   
   0.999
ENSCWAP00000018117
annotation not available
   
   0.999
RPS3
Ribosomal protein S3.
   
 
 0.977
RPS21
Ribosomal protein S21.
   
 
 0.950
ENSCWAP00000016290
annotation not available
   
 
 0.945
RPS5
Ribosomal protein S5.
   
   0.945
RPL19
Ribosomal protein L19.
   
   0.941
RPL8
Ribosomal protein L8.
   
   0.940
RPS19
Ribosomal protein S19.
   
   0.939
RPS3A
Ribosomal protein S3A.
   
 
 0.939
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.