STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL53Mitochondrial ribosomal protein L53. (120 aa)    
Predicted Functional Partners:
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.972
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.964
MRPL16
Mitochondrial ribosomal protein L16.
    
 0.957
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.955
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.955
MRPL11
Mitochondrial ribosomal protein L11.
   
 
 0.954
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.948
MRPL51
Mitochondrial ribosomal protein L51.
    
 
 0.948
ENSCWAP00000020867
annotation not available
    
 
 0.947
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.942
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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