STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSEN2tRNA splicing endonuclease subunit 2. (465 aa)    
Predicted Functional Partners:
TSEN34
tRNA splicing endonuclease subunit 34.
    
 0.999
TSEN54
tRNA splicing endonuclease subunit 54.
    
 0.997
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
 0.995
RPP40
Ribonuclease P/MRP subunit p40.
   
 
  0.994
LAS1L
LAS1 like ribosome biogenesis factor.
   
 
  0.993
RPP25
Ribonuclease P and MRP subunit p25.
     
 0.989
POP1
POP1 homolog, ribonuclease P/MRP subunit.
     
 0.987
POP4
POP4 homolog, ribonuclease P/MRP subunit.
   
 
 0.986
RPP38
Ribonuclease P/MRP subunit p38.
     
 0.986
TARBP2
TARBP2 subunit of RISC loading complex.
     
 0.983
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.