STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPHD2Aspartate beta-hydroxylase domain containing 2. (368 aa)    
Predicted Functional Partners:
TMEM53
Transmembrane protein 53.
      
 0.788
ACBD6
acyl-CoA binding domain containing 6.
      
 0.788
DNAJC3
DnaJ heat shock protein family (Hsp40) member C3.
      
 0.648
NTPCR
Nucleoside-triphosphatase, cancer-related.
      
 0.625
RYR1
Ryanodine receptor 1.
   
 
 0.577
RYR2
Ryanodine receptor 2.
   
 
 0.577
RYR3
Ryanodine receptor 3.
   
 
 0.577
FKBP1B
FKBP prolyl isomerase 1B.
     
 0.519
ENSCWAP00000006573
annotation not available
     
 0.519
FKBP3
FKBP prolyl isomerase 3.
     
 0.519
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.