STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3ARAB3A, member RAS oncogene family. (220 aa)    
Predicted Functional Partners:
ENSCWAP00000018079
annotation not available
   
 
 0.984
SYT1
Synaptotagmin 1.
   
 0.982
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.979
SYT2
Synaptotagmin 2.
   
 0.977
DNAJC5
DnaJ heat shock protein family (Hsp40) member C5.
     
 0.964
SLC32A1
Solute carrier family 32 member 1.
   
 
 0.958
SLC17A7
Solute carrier family 17 member 7.
     
 0.957
SLC18A3
Solute carrier family 18 member A3.
     
 0.957
SLC18A2
Solute carrier family 18 member A2.
     
 0.946
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.945
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.