STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCHL1Ubiquitin C-terminal hydrolase L1. (223 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 0.978
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.950
ENSCWAP00000006692
annotation not available
    
 0.905
RPS27A
Ribosomal protein S27a.
    
 0.905
ENSCWAP00000022461
annotation not available
    
 0.905
ENSCWAP00000019878
annotation not available
   
 0.864
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.839
UBD
Ubiquitin D.
    
 0.796
GNAT3
G protein subunit alpha transducin 3.
    
 0.791
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.790
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.