STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAPLN1Hyaluronan and proteoglycan link protein 1. (354 aa)    
Predicted Functional Partners:
ACAN
Aggrecan.
   
0.982
TNC
Tenascin C.
    
 0.764
VCAN
Versican.
    
0.746
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
NCAN
Neurocan.
    
0.700
CLEC19A
C-type lectin domain containing 19A.
    
 0.661
PRELP
Proline and arginine rich end leucine rich repeat protein.
    
 
 0.658
CILP
Cartilage intermediate layer protein.
      
 0.656
CHST13
Carbohydrate sulfotransferase 13.
      
 0.648
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.647
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.