STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT19Keratin 19. (400 aa)    
Predicted Functional Partners:
KRT8
Keratin 8.
   
0.930
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
KRT18
Keratin 18.
   
0.779
DAG1
Dystroglycan 1.
     
 0.777
EPCAM
Epithelial cell adhesion molecule.
   
  
 0.753
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.728
KRT7
Keratin 7.
  
 
0.712
RANBP2
RAN binding protein 2.
    
 0.698
KDM6B
Lysine demethylase 6B.
    
 0.686
KDM6A
Lysine demethylase 6A.
    
 0.686
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.