STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT9BtRNA methyltransferase 9B (putative). (453 aa)    
Predicted Functional Partners:
ENSCWAP00000011865
annotation not available
   
 0.984
ENSCWAP00000023188
annotation not available
   
 0.984
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.885
TRMT11
tRNA methyltransferase 11 homolog.
   
 0.825
TRMT6
tRNA methyltransferase 6.
   
 0.814
TRMT61A
tRNA methyltransferase 61A.
  
 0.749
TRMT61B
tRNA methyltransferase 61B.
  
 0.749
TSR1
TSR1 ribosome maturation factor.
   
  0.744
ENSCWAP00000001437
annotation not available
   
 0.731
BYSL
Bystin like.
   
 0.724
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.