STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GASK1BGolgi associated kinase 1B. (519 aa)    
Predicted Functional Partners:
MRVI1
Murine retrovirus integration site 1 homolog.
      
 0.636
LRRC3B
Leucine rich repeat containing 3B.
      
 0.636
STOX1
Storkhead box 1.
      
 0.602
FAM20C
FAM20C golgi associated secretory pathway kinase.
      
 0.598
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.597
DOC2B
Double C2 domain beta.
      
 0.583
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
      
 0.571
KCNT2
Potassium sodium-activated channel subfamily T member 2.
      
 0.530
DIAPH2
Diaphanous related formin 2.
      
 0.530
PLAAT1
Phospholipase A and acyltransferase 1.
      
 0.512
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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