STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHRF1BP1LUHRF1 binding protein 1 like. (1457 aa)    
Predicted Functional Partners:
GPATCH2L
G-patch domain containing 2 like.
      
 0.685
ENSCWAP00000009644
annotation not available
      
 0.598
GPATCH2
G-patch domain containing 2.
      
 0.598
ENSCWAP00000027337
annotation not available
      
 0.595
FAM83A
Family with sequence similarity 83 member A.
   
  
 0.562
OR7G3
Olfactory receptor family 7 subfamily G member 3.
      
 0.508
RAB39B
RAB39B, member RAS oncogene family.
    
 
 0.505
VPS13C
Vacuolar protein sorting 13 homolog C.
      
 0.491
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
      
 0.485
ATP13A2
ATPase cation transporting 13A2.
      
 0.483
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.