STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR35Proline rich 35. (558 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing 36.
      
 0.753
CCDC36
Coiled-coil domain containing 36.
      
 0.753
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.714
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.701
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.676
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.673
ENSCWAP00000025803
annotation not available
      
 0.661
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3.
      
 0.653
XPC
XPC complex subunit, DNA damage recognition and repair factor.
      
 0.630
KLHDC8B
Kelch domain containing 8B.
      
 0.629
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.