STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCC1Transmembrane and coiled-coil domain family 1. (651 aa)    
Predicted Functional Partners:
HAUS7
HAUS augmin like complex subunit 7.
      
 0.699
PNCK
Pregnancy up-regulated nonubiquitous CaM kinase.
      
 0.690
TMCC3
Transmembrane and coiled-coil domain family 3.
  
 
 
0.618
ENSCWAP00000015036
annotation not available
      
 0.611
NAA10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
      
 0.599
NAA11
N(alpha)-acetyltransferase 11, NatA catalytic subunit.
      
 0.599
KRTCAP3
Keratinocyte associated protein 3.
      
 0.594
ZBTB5
Zinc finger and BTB domain containing 5.
      
 0.556
TMEM181
Transmembrane protein 181.
      
 0.548
SUSD3
Sushi domain containing 3.
      
 0.524
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.