STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB2Lamin B2. (627 aa)    
Predicted Functional Partners:
LMNA
Lamin A/C.
    
0.985
ENSCWAP00000017881
annotation not available
   
 0.961
LMNB1
Lamin B1.
     
0.947
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.938
ENSCWAP00000000551
annotation not available
    
 0.935
ENSCWAP00000000583
annotation not available
    
 0.935
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.932
CASP6
Caspase 6.
    
 0.924
GZMB
Granzyme B.
    
 0.904
BANF2
Barrier to autointegration factor 2.
   
 0.898
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.