STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBEAL2Neurobeachin like 2. (2751 aa)    
Predicted Functional Partners:
TMEM51
Transmembrane protein 51.
      
 0.764
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
      
 0.739
CDC42EP3
CDC42 effector protein 3.
      
 0.734
UBE2K
Ubiquitin conjugating enzyme E2 K.
      
 0.668
VIPAS39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog.
      
 0.658
CCDC12
Coiled-coil domain containing 12.
      
 0.641
METTL9
Methyltransferase like 9.
      
 0.627
MOXD1
Monooxygenase DBH like 1.
      
 0.604
CARD11
Caspase recruitment domain family member 11.
   
 
 0.540
MYH9
Myosin heavy chain 9.
      
 0.530
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.