STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPV5Transient receptor potential cation channel subfamily V member 5. (730 aa)    
Predicted Functional Partners:
TRPM2
Transient receptor potential cation channel subfamily M member 2.
     
 0.758
TRPA1
Transient receptor potential cation channel subfamily A member 1.
     
 0.734
TRPM8
Transient receptor potential cation channel subfamily M member 8.
     
 0.733
TRPM7
Transient receptor potential cation channel subfamily M member 7.
     
 0.732
TRPM4
Transient receptor potential cation channel subfamily M member 4.
     
 0.725
CALML5
Calmodulin like 5.
    
 
 0.713
TRPM6
Transient receptor potential cation channel subfamily M member 6.
     
 0.703
TRPC1
Transient receptor potential cation channel subfamily C member 1.
     
 0.677
PRKCG
Protein kinase C gamma.
    
 0.672
ENSCWAP00000004754
annotation not available
    
 
 0.659
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.