STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QTRT1Queuine tRNA-ribosyltransferase catalytic subunit 1. (403 aa)    
Predicted Functional Partners:
QTRT2
Queuine tRNA-ribosyltransferase accessory subunit 2.
  
0.992
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.886
GCDH
glutaryl-CoA dehydrogenase.
   
  
 0.877
BCKDK
Branched chain keto acid dehydrogenase kinase.
     
 0.798
TRABD
TraB domain containing.
      
 0.786
AK6
Adenylate kinase 6.
  
  
 0.764
NUDT22
Nudix hydrolase 22.
      
 0.757
ENSCWAP00000004614
annotation not available
      
 0.743
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.741
ENSCWAP00000018551
annotation not available
      
 0.727
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.