STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM17RNA binding motif protein 17. (401 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
 0.999
U2SURP
U2 snRNP associated SURP domain containing.
   
 0.998
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
 0.995
SUGP1
SURP and G-patch domain containing 1.
   
 
 0.990
ENSCWAP00000025486
annotation not available
   
 0.983
ENSCWAP00000025660
annotation not available
   
 0.982
SNRPB2
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.976
SF3A3
Splicing factor 3a subunit 3.
   
 0.969
SF3A2
Splicing factor 3a subunit 2.
    
 0.968
SF3A1
Splicing factor 3a subunit 1.
   
 0.964
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.