ENSCWAP00000026695 protein (Catagonus wagneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCWAP00000026695

annotation not available (243 aa)

Predicted Functional Partners:

ENSCWAP00000026648

0.907

NPC1

0.898

NPC1L1

0.701

PHLDA2

0.671

TSSC4

0.634

NIPSNAP2

0.605

NIPSNAP1

0.605

RHOJ

0.582

RHOH

0.582

RHOQ

0.582

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000026648	ENSCWAP00000026695	ENSCWAP00000026648	ENSCWAP00000026695	annotation not available	annotation not available	0.907
ENSCWAP00000026648	NIPSNAP1	ENSCWAP00000026648	ENSCWAP00000019053	annotation not available	Nipsnap homolog 1.	0.605
ENSCWAP00000026648	NIPSNAP2	ENSCWAP00000026648	ENSCWAP00000007778	annotation not available	Nipsnap homolog 2.	0.605
ENSCWAP00000026648	NPC1	ENSCWAP00000026648	ENSCWAP00000007009	annotation not available	NPC intracellular cholesterol transporter 1.	0.898
ENSCWAP00000026648	NPC1L1	ENSCWAP00000026648	ENSCWAP00000003396	annotation not available	NPC1 like intracellular cholesterol transporter 1.	0.701
ENSCWAP00000026648	PHLDA2	ENSCWAP00000026648	ENSCWAP00000026273	annotation not available	Pleckstrin homology like domain family A member 2.	0.671
ENSCWAP00000026648	RHOH	ENSCWAP00000026648	ENSCWAP00000022386	annotation not available	Ras homolog family member H.	0.582
ENSCWAP00000026648	RHOJ	ENSCWAP00000026648	ENSCWAP00000020008	annotation not available	Ras homolog family member J.	0.582
ENSCWAP00000026648	RHOQ	ENSCWAP00000026648	ENSCWAP00000025874	annotation not available	Ras homolog family member Q.	0.582
ENSCWAP00000026648	TSSC4	ENSCWAP00000026648	ENSCWAP00000013374	annotation not available	Tumor suppressing subtransferable candidate 4.	0.634
ENSCWAP00000026695	ENSCWAP00000026648	ENSCWAP00000026695	ENSCWAP00000026648	annotation not available	annotation not available	0.907
ENSCWAP00000026695	NIPSNAP1	ENSCWAP00000026695	ENSCWAP00000019053	annotation not available	Nipsnap homolog 1.	0.605
ENSCWAP00000026695	NIPSNAP2	ENSCWAP00000026695	ENSCWAP00000007778	annotation not available	Nipsnap homolog 2.	0.605
ENSCWAP00000026695	NPC1	ENSCWAP00000026695	ENSCWAP00000007009	annotation not available	NPC intracellular cholesterol transporter 1.	0.898
ENSCWAP00000026695	NPC1L1	ENSCWAP00000026695	ENSCWAP00000003396	annotation not available	NPC1 like intracellular cholesterol transporter 1.	0.701
ENSCWAP00000026695	PHLDA2	ENSCWAP00000026695	ENSCWAP00000026273	annotation not available	Pleckstrin homology like domain family A member 2.	0.671
ENSCWAP00000026695	RHOH	ENSCWAP00000026695	ENSCWAP00000022386	annotation not available	Ras homolog family member H.	0.582
ENSCWAP00000026695	RHOJ	ENSCWAP00000026695	ENSCWAP00000020008	annotation not available	Ras homolog family member J.	0.582
ENSCWAP00000026695	RHOQ	ENSCWAP00000026695	ENSCWAP00000025874	annotation not available	Ras homolog family member Q.	0.582
ENSCWAP00000026695	TSSC4	ENSCWAP00000026695	ENSCWAP00000013374	annotation not available	Tumor suppressing subtransferable candidate 4.	0.634