STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM193AFamily with sequence similarity 193 member A. (1463 aa)    
Predicted Functional Partners:
DCTN2
Dynactin subunit 2.
   
 0.973
DCTN4
Dynactin subunit 4.
    
 0.965
DCTN3
Dynactin subunit 3.
   
 0.949
DCTN6
Dynactin subunit 6.
    
 0.934
DCTN5
Dynactin subunit 5.
    
 0.933
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.909
DYNC1LI2
Dynein cytoplasmic 1 light intermediate chain 2.
   
 0.841
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
   
 0.841
BICD1
BICD cargo adaptor 1.
    
 0.834
BICD2
BICD cargo adaptor 2.
    
 0.834
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.