STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3FSemaphorin 3F. (785 aa)    
Predicted Functional Partners:
NRP2
Neuropilin 2.
    
 
 0.987
NRP1
Neuropilin 1.
    
 0.987
PLXNA3
Plexin A3.
    
 0.963
PLXNA1
Plexin A1.
    
 0.847
PLXNC1
Plexin C1.
    
 0.831
PLXNA4
Plexin A4.
    
0.829
PLXND1
Plexin D1.
    
 0.829
PLXNA2
Plexin A2.
    
0.782
SLIT1
Slit guidance ligand 1.
      
 0.766
MST1R
Macrophage stimulating 1 receptor.
    
 0.745
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.