STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000026923annotation not available (888 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4C.
    
 0.990
SDCBP
Syndecan binding protein.
    
 0.985
TSG101
Tumor susceptibility 101.
   
 0.984
CHMP4A
Charged multivesicular body protein 4A.
    
 0.984
ENSCWAP00000008358
annotation not available
    
 0.982
ENSCWAP00000011115
annotation not available
    
 0.982
MVB12A
Multivesicular body subunit 12A.
     
 0.949
MDP1
Magnesium dependent phosphatase 1.
    
 0.943
MVB12B
Multivesicular body subunit 12B.
     
 0.924
PDCD6
Programmed cell death 6.
    
 
 0.915
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.