STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRTAC1Cartilage acidic protein 1. (656 aa)    
Predicted Functional Partners:
LRFN1
Leucine rich repeat and fibronectin type III domain containing 1.
      
 0.726
BRINP2
BMP/retinoic acid inducible neural specific 2.
   
  
 0.709
MAPRE2
Microtubule associated protein RP/EB family member 2.
    
   0.687
CCDC137
Coiled-coil domain containing 137.
      
 0.616
MMAB
Metabolism of cobalamin associated B.
      
 0.609
VSTM2B
V-set and transmembrane domain containing 2B.
   
  
 0.593
GTPBP4
GTP binding protein 4.
      
 0.588
NPTX1
Neuronal pentraxin 1.
   
  
 0.576
AGTPBP1
ATP/GTP binding protein 1.
      
 0.576
ENSCWAP00000009988
annotation not available
      
 0.555
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.