STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC10A4Solute carrier family 10 member 4. (458 aa)    
Predicted Functional Partners:
SLC44A5
Solute carrier family 44 member 5.
   
  
 0.656
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.656
ENSCWAP00000001267
annotation not available
      
 0.655
ENSCWAP00000008227
annotation not available
   
  
 0.647
SNAPIN
SNAP associated protein.
     
 0.628
CDC20B
Cell division cycle 20B.
      
 0.619
NIPAL1
NIPA like domain containing 1.
      
 0.606
PLA2R1
Phospholipase A2 receptor 1.
      
 0.605
BLOC1S3
Biogenesis of lysosomal organelles complex 1 subunit 3.
     
 0.601
ENSCWAP00000010294
annotation not available
     
 0.601
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.