STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM23RNA binding motif protein 23. (448 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
 0.934
RBM25
RNA binding motif protein 25.
   
0.932
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.912
DDX5
DEAD-box helicase 5.
   
 0.900
CDC5L
Cell division cycle 5 like.
   
 
 0.893
ENSCWAP00000003579
annotation not available
   
   0.876
ENSCWAP00000015078
annotation not available
   
   0.876
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 
0.846
SRSF3
Serine and arginine rich splicing factor 3.
   
 
 0.823
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.816
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.