STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH10Protocadherin 10. (1039 aa)    
Predicted Functional Partners:
CTNNAL1
Catenin alpha like 1.
    
 0.711
ENSCWAP00000001506
annotation not available
    
 
 0.676
SLC35D3
Solute carrier family 35 member D3.
      
 0.648
PNKD
PNKD metallo-beta-lactamase domain containing.
      
 0.648
TMEM230
Transmembrane protein 230.
      
 0.648
ENSCWAP00000026569
annotation not available
    
 
 0.620
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.610
ENSCWAP00000022749
annotation not available
      
 0.598
TIMM21
Translocase of inner mitochondrial membrane 21.
      
 0.597
MYO9A
Myosin IXA.
    
 0.591
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.