STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA45Spermatogenesis associated 45. (97 aa)    
Predicted Functional Partners:
TEX43
Testis expressed 43.
      
 0.752
TEX35
Testis expressed 35.
      
 0.752
SPEM1
Spermatid maturation 1.
      
 0.690
CBY2
Chibby family member 2.
      
 0.668
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.664
ENSCWAP00000016255
annotation not available
  
   
 0.657
ENSCWAP00000016348
annotation not available
  
   
 0.657
SPATA18
Spermatogenesis associated 18.
      
 0.604
SPATA3
Spermatogenesis associated 3.
  
   
 0.484
CCDC182
Coiled-coil domain containing 182.
  
     0.412
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.