CFPG_147 protein (Azobacteroides pseudotrichonymphae)

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Score

CFPG_147

Conserved hypothetical protein. (158 aa)

Predicted Functional Partners:

rpoA

0.992

rpoB

0.991

rpoC

0.987

CFPG_146

0.909

nusG

0.894

CFPG_205

0.889

rho

0.870

greA

0.868

rpsU

0.853

rpsB

0.852

Your Current Organism:

Azobacteroides pseudotrichonymphae

NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFPG_146	CFPG_147	CFPG_146	CFPG_147	Conserved hypothetical protein.	Conserved hypothetical protein.	0.909
CFPG_146	rpsU	CFPG_146	CFPG_411	Conserved hypothetical protein.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.552
CFPG_147	CFPG_146	CFPG_147	CFPG_146	Conserved hypothetical protein.	Conserved hypothetical protein.	0.909
CFPG_147	CFPG_205	CFPG_147	CFPG_205	Conserved hypothetical protein.	Putative RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.889
CFPG_147	greA	CFPG_147	CFPG_400	Conserved hypothetical protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.868
CFPG_147	nusG	CFPG_147	CFPG_011	Conserved hypothetical protein.	Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.	0.894
CFPG_147	rho	CFPG_147	CFPG_003	Conserved hypothetical protein.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.870
CFPG_147	rpoA	CFPG_147	CFPG_069	Conserved hypothetical protein.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.992
CFPG_147	rpoB	CFPG_147	CFPG_006	Conserved hypothetical protein.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
CFPG_147	rpoC	CFPG_147	CFPG_005	Conserved hypothetical protein.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.987
CFPG_147	rpsB	CFPG_147	CFPG_286	Conserved hypothetical protein.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.852
CFPG_147	rpsU	CFPG_147	CFPG_411	Conserved hypothetical protein.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.853
CFPG_205	CFPG_147	CFPG_205	CFPG_147	Putative RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Conserved hypothetical protein.	0.889
CFPG_205	rpoA	CFPG_205	CFPG_069	Putative RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.919
CFPG_205	rpoB	CFPG_205	CFPG_006	Putative RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.936
CFPG_205	rpoC	CFPG_205	CFPG_005	Putative RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.913
CFPG_205	rpsB	CFPG_205	CFPG_286	Putative RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.448
greA	CFPG_147	CFPG_400	CFPG_147	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Conserved hypothetical protein.	0.868
greA	rpoA	CFPG_400	CFPG_069	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.865
greA	rpoB	CFPG_400	CFPG_006	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.893