Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_181M23 family peptidase. (415 aa)    
Predicted Functional Partners:
CFPG_183
Conserved hypothetical protein.
 
 
   0.933
CFPG_431
Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.922
CFPG_182
Conserved hypothetical protein.
       0.809
CFPG_426
N-acetylmuramoyl-L-alanine amidase.
 
   0.799
CFPG_457
Cell division protein FtsE.
 
 
 
 0.772
dut
dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.759
CFPG_693
Putative N-acetylmuramoyl-L-alanine amidase.
 
   0.707
CFPG_119
M23 family peptidase.
 
   
 0.518
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
 
 
   0.475
CFPG_475
Conserved hypothetical protein.
  
   
 0.419
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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