Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CFPG_188uroporphyrinogen-III synthase. (252 aa)    
Predicted Functional Partners:
CFPG_278
Hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
 0.981
CFPG_170
4-hydroxythreonine-4-phosphate dehydrogenase.
  
     0.773
CFPG_147
Conserved hypothetical protein.
  
     0.769
CFPG_508
Conserved hypothetical protein.
  
     0.762
CFPG_189
Conserved hypothetical protein.
       0.757
CFPG_162
Conserved hypothetical protein.
  
     0.739
CFPG_214
Putative cell division protein FtsQ.
  
     0.735
CFPG_250
Conserved hypothetical protein.
  
     0.732
CFPG_353
Conserved hypothetical protein.
  
     0.714
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
 
     0.667
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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