Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CFPG_239Heterodisulfide reductase subunit B. (281 aa)    
Predicted Functional Partners:
CFPG_238
Heterodisulfide reductase subunit C.
 0.999
CFPG_240
Heterodisulfide reductase subunit A.
 
 0.994
CFPG_241
Heterodisulfide reductase subunit MvhD.
 
 0.993
CFPG_242
Putative hydrogenase 4Fe-4S binding subunit.
 
     0.790
CFPG_237
Inorganic phosphate transporter.
       0.686
CFPG_448
Putative pyruvate-flavodoxin oxidoreductase.
  
  
 0.558
CFPG_236
Putative pit accessory protein.
       0.510
CFPG_524
Rod shape-determining protein MreB.
    
   0.483
CFPG_243
Putative hydrogenase beta subunit.
 
 
 
 0.478
uxaC
Glucuronate isomerase.
       0.401
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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