Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_313Glutamate synthase small subunit. (471 aa)    
Predicted Functional Partners:
CFPG_312
Glutamate synthase large subunit.
 0.999
CFPG_261
Ferredoxin.
   
 0.928
carA
Carbamoyl-phosphate synthase; Belongs to the CarA family.
  
 
 0.917
CFPG_582
NADPH-dependent glutamate synthase small subunit.
  
  
 
0.916
CFPG_521
Glutamine synthetase.
    
 0.910
CFPG_663
Putative amidohydrolase.
  
  0.908
CFPG_504
Glucosamine--fructose-6-phosphate aminotransferase.
    
 0.905
CFPG_212
Amidophosphoribosyltransferase.
  
 
  0.903
CFPG_356
Aspartate aminotransferase.
   
 
 0.902
CFPG_438
Aspartate aminotransferase.
   
 
 0.902
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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