STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_341Conserved hypothetical protein. (102 aa)    
Predicted Functional Partners:
CFPG_214
Putative cell division protein FtsQ.
 
 
 
 0.956
CFPG_201
Conserved hypothetical protein.
  
     0.755
CFPG_740
Peptidoglycan synthetase ftsI homolog.
 
 
 0.717
CFPG_741
Conserved hypothetical protein.
  
     0.694
CFPG_319
Putative peptidyl-prolyl cis-trans isomerase.
 
  
 0.687
CFPG_154
Conserved hypothetical protein.
  
     0.679
CFPG_190
Conserved hypothetical protein.
  
     0.678
CFPG_477
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.667
CFPG_653
Conserved hypothetical protein.
  
     0.666
CFPG_475
Conserved hypothetical protein.
  
   
 0.651
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.