Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CFPG_020 | CFPG_174 | CFPG_020 | CFPG_174 | Anthranilate synthase component I. | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | 0.943 |
CFPG_020 | CFPG_389 | CFPG_020 | CFPG_389 | Anthranilate synthase component I. | Anthranilate synthase component II. | 0.999 |
CFPG_020 | CFPG_391 | CFPG_020 | CFPG_391 | Anthranilate synthase component I. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.995 |
CFPG_020 | trpA | CFPG_020 | CFPG_393 | Anthranilate synthase component I. | Tryptophan synthase alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.912 |
CFPG_020 | trpB | CFPG_020 | CFPG_041 | Anthranilate synthase component I. | Tryptophan synthase beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.720 |
CFPG_020 | trpD | CFPG_020 | CFPG_390 | Anthranilate synthase component I. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.998 |
CFPG_020 | trpF | CFPG_020 | CFPG_392 | Anthranilate synthase component I. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.875 |
CFPG_174 | CFPG_020 | CFPG_174 | CFPG_020 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Anthranilate synthase component I. | 0.943 |
CFPG_174 | CFPG_389 | CFPG_174 | CFPG_389 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Anthranilate synthase component II. | 0.950 |
CFPG_174 | CFPG_391 | CFPG_174 | CFPG_391 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.478 |
CFPG_174 | CFPG_567 | CFPG_174 | CFPG_567 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Shikimate 5-dehydrogenase. | 0.882 |
CFPG_174 | trpA | CFPG_174 | CFPG_393 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Tryptophan synthase alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.447 |
CFPG_174 | trpD | CFPG_174 | CFPG_390 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.473 |
CFPG_174 | trpF | CFPG_174 | CFPG_392 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.451 |
CFPG_389 | CFPG_020 | CFPG_389 | CFPG_020 | Anthranilate synthase component II. | Anthranilate synthase component I. | 0.999 |
CFPG_389 | CFPG_174 | CFPG_389 | CFPG_174 | Anthranilate synthase component II. | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | 0.950 |
CFPG_389 | CFPG_391 | CFPG_389 | CFPG_391 | Anthranilate synthase component II. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.996 |
CFPG_389 | CFPG_394 | CFPG_389 | CFPG_394 | Anthranilate synthase component II. | Replicative DNA helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.545 |
CFPG_389 | CFPG_567 | CFPG_389 | CFPG_567 | Anthranilate synthase component II. | Shikimate 5-dehydrogenase. | 0.568 |
CFPG_389 | hisI | CFPG_389 | CFPG_456 | Anthranilate synthase component II. | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family. | 0.431 |
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