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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_439NADP-dependent thioredoxin reductase. (325 aa)    
Predicted Functional Partners:
CFPG_350
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.932
CFPG_640
Selenocysteine lyase/cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.905
CFPG_438
Aspartate aminotransferase.
  
  
 0.683
CFPG_448
Putative pyruvate-flavodoxin oxidoreductase.
  
 
 0.569
CFPG_274
Molybdopterin biosynthesis protein MoeB.
  
  
 0.544
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
 
 0.482
CFPG_312
Glutamate synthase large subunit.
     
 0.471
CFPG_315
Putative kef-type K+(efflux) /H+ antiporter.
  
  
 0.461
secF
Preprotein translocase SecD/SecF subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.455
CFPG_657
Homoserine dehydrogenase/aspartate kinase.
 
  
 0.449
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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