CFPG_511 protein (Azobacteroides pseudotrichonymphae)

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Score

CFPG_511

Peptide chain release factor 2. (328 aa)

Predicted Functional Partners:

rplU

0.939

rplT

0.906

rpsG

0.904

rpsP

0.882

rplM

0.881

rpmA

0.874

rpsF

0.873

rplB

0.873

rpsL

0.868

rplQ

0.860

Your Current Organism:

Azobacteroides pseudotrichonymphae

NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFPG_511	rplB	CFPG_511	CFPG_091	Peptide chain release factor 2.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.873
CFPG_511	rplM	CFPG_511	CFPG_284	Peptide chain release factor 2.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.881
CFPG_511	rplQ	CFPG_511	CFPG_068	Peptide chain release factor 2.	50S ribosomal protein L17.	0.860
CFPG_511	rplT	CFPG_511	CFPG_102	Peptide chain release factor 2.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.906
CFPG_511	rplU	CFPG_511	CFPG_536	Peptide chain release factor 2.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.939
CFPG_511	rpmA	CFPG_511	CFPG_537	Peptide chain release factor 2.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.874
CFPG_511	rpsF	CFPG_511	CFPG_017	Peptide chain release factor 2.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.873
CFPG_511	rpsG	CFPG_511	CFPG_097	Peptide chain release factor 2.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.904
CFPG_511	rpsL	CFPG_511	CFPG_098	Peptide chain release factor 2.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.868
CFPG_511	rpsP	CFPG_511	CFPG_717	Peptide chain release factor 2.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.882
rplB	CFPG_511	CFPG_091	CFPG_511	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Peptide chain release factor 2.	0.873
rplB	rplM	CFPG_091	CFPG_284	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.993
rplB	rplQ	CFPG_091	CFPG_068	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L17.	0.993
rplB	rplT	CFPG_091	CFPG_102	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.992
rplB	rplU	CFPG_091	CFPG_536	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.978
rplB	rpmA	CFPG_091	CFPG_537	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.971
rplB	rpsF	CFPG_091	CFPG_017	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.991
rplB	rpsG	CFPG_091	CFPG_097	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.992
rplB	rpsL	CFPG_091	CFPG_098	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.992
rplB	rpsP	CFPG_091	CFPG_717	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.978