STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_552Nitrogenase molybdenum-cofactor biosynthesis protein NifB. (419 aa)    
Predicted Functional Partners:
CFPG_551
Nitrogenase molybdenum-iron protein beta subunit 2; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.992
CFPG_549
Nitrogenase molybdenum-iron protein beta subunit 1; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.979
CFPG_550
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.934
CFPG_548
Nitrogenase molybdenum-iron protein alpha subunit.
 
  
 0.916
nifH
Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
 
  
 0.855
CFPG_553
2Fe-2S ferredoxin.
 
     0.595
CFPG_546
Nitrogen regulatory protein P-II 1.
  
  
 0.535
CFPG_547
Nitrogen regulatory protein P-II 2.
  
  
 0.534
CFPG_278
Hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
  
 0.524
CFPG_448
Putative pyruvate-flavodoxin oxidoreductase.
  
  
 0.427
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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