STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_558Cobalamin-dependent methylmalonyl-CoA mutase large subunit. (621 aa)    
Predicted Functional Partners:
CFPG_311
Putative LAO/AO transport system kinase.
 
 0.999
CFPG_557
Cobalamin-dependent methylmalonyl-CoA mutase large subunit.
 
0.999
CFPG_529
Putative methylmalonyl-CoA epimerase.
 
  
 0.965
CFPG_198
2-oxoglutarate ferredoxin oxidoreductase alpha/gamma subunit.
    
 0.939
CFPG_265
2-oxoisovalerate ferredoxin oxidoreductase gamma subunit.
     
 0.923
CFPG_263
2-oxoisovalerate ferredoxin oxidoreductase alpha subunit.
     
 0.922
CFPG_197
2-oxoglutarate ferredoxin oxidoreductase beta subunit.
     
 0.907
CFPG_264
2-oxoisovalerate ferredoxin oxidoreductase beta subunit.
     
 0.907
CFPG_261
Ferredoxin.
    
  0.901
CFPG_448
Putative pyruvate-flavodoxin oxidoreductase.
    
 0.899
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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