STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_573Outer membrane protein assembly factor YaeT. (840 aa)    
Predicted Functional Partners:
CFPG_146
Conserved hypothetical protein.
 
 
 0.982
fabZ
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3R-hydroxymyristoyl ACP dehydrase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.
 
  
 0.845
CFPG_561
Peptidyl-prolyl cis-trans isomerase SurA.
 
 
 0.818
CFPG_354
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.800
CFPG_574
OmpH-like outer membrane protein.
 
  
 0.785
CFPG_554
Conserved hypothetical protein.
  
     0.754
CFPG_319
Putative peptidyl-prolyl cis-trans isomerase.
 
 
 0.730
CFPG_370
Membrane-associated Zn-dependent protease.
 
  
 0.707
CFPG_044
Conserved hypothetical protein.
  
     0.680
CFPG_375
Conserved hypothetical protein.
  
     0.650
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.