Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CFPG_640Selenocysteine lyase/cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (412 aa)    
Predicted Functional Partners:
CFPG_638
Fe-S cluster assembly protein SufC.
 
  
 0.989
CFPG_639
Fe-S cluster assembly protein SufD.
 
 
 0.967
CFPG_439
NADP-dependent thioredoxin reductase.
  
 
  0.905
CFPG_634
Fe-S cluster assembly protein SufB.
 
 
 0.812
CFPG_308
Cysteine desulfuration protein SufE.
  
 
 0.762
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
  
    0.699
CFPG_642
Phosphatidylserine synthase.
       0.678
CFPG_378
Conserved hypothetical protein.
    
   0.647
CFPG_637
Phosphomannomutase.
       0.614
CFPG_643
Putative cadmium efflux ATPase.
  
    0.593
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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