Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFPG_709Conserved hypothetical protein. (946 aa)    
Predicted Functional Partners:
CFPG_296
Exodeoxyribonuclease V beta subunit.
 
 
 0.981
CFPG_051
Conserved hypothetical protein.
  
     0.732
CFPG_162
Conserved hypothetical protein.
  
     0.631
CFPG_012
Putative preprotein translocase SecE subunit; Belongs to the SecE/SEC61-gamma family.
  
     0.629
CFPG_353
Conserved hypothetical protein.
  
     0.585
CFPG_387
Conserved hypothetical protein.
  
     0.533
CFPG_124
Conserved hypothetical protein.
  
     0.485
CFPG_451
Hemolysin A.
  
     0.470
CFPG_600
Voltage-gated ClC-type chloride channel.
 
    0.466
CFPG_450
Conserved hypothetical protein.
  
     0.427
Your Current Organism:
Azobacteroides pseudotrichonymphae
NCBI taxonomy Id: 511995
Other names: C. Azobacteroides pseudotrichonymphae genomovar. CFP2, Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
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