STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_00250Binding-protein-dependent transport systems inner membrane component; COG4662 ABC-type tungstate transport system, periplasmic component. (245 aa)    
Predicted Functional Partners:
KYG_00260
Extracellular solute-binding protein family 1; COG2998 ABC-type tungstate transport system, permease component.
 
  
 0.994
KYG_00255
ABC transporter-like protein; COG1126 ABC-type polar amino acid transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
  0.971
KYG_00245
Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein.
 
 
 0.944
fdhD
Formate dehydrogenase subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.798
KYG_03726
Hypothetical protein; COG1145 Ferredoxin.
 
   
 0.775
KYG_03741
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.766
KYG_03731
Cytoplasmic chaperone TorD family protein; COG3381 Uncharacterized component of anaerobic dehydrogenases.
 
    0.764
KYG_03746
4Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
   
 0.753
KYG_03711
Formate dehydrogenase, alpha subunit; COG3383 Uncharacterized anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.743
KYG_03756
COG2864 Cytochrome b subunit of formate dehydrogenase.
 
     0.733
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.