STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_002652-octaprenylphenol hydroxylase; COG0661 Predicted unusual protein kinase. (565 aa)    
Predicted Functional Partners:
KYG_02487
Family 2 glycosyl transferase; COG0500 SAM-dependent methyltransferases.
  
 0.668
KYG_00270
Hypothetical protein.
       0.634
ubiG
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
    
 
 0.463
coq7
Putative ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 
 0.458
KYG_00275
Fis family transcriptional regulator; COG3284 Transcriptional activator of acetoin/glycerol metabolism.
       0.456
KYG_12869
Methyltransferase type 12; COG0500 SAM-dependent methyltransferases.
    
 
 0.432
KYG_15705
COG0113 Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.414
KYG_01637
Type 11 methyltransferase; COG0500 SAM-dependent methyltransferases.
    
 
 0.400
KYG_06519
Cyclase/dehydrase; COG2867 Oligoketide cyclase/lipid transport protein.
    
 
 0.400
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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