STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_00410Hypothetical protein. (100 aa)    
Predicted Functional Partners:
KYG_00415
Hypothetical protein.
 
     0.895
KYG_00420
Membrane protein.
 
     0.698
KYG_01912
Hypothetical protein.
  
     0.676
KYG_15935
COG4185 Uncharacterized protein conserved in bacteria.
  
 
 
 0.660
KYG_14603
General secretion pathway L.
  
     0.658
KYG_14623
General secretion pathway protein H.
  
     0.647
KYG_03391
COG5488 Integral membrane protein.
  
     0.634
KYG_08250
Putative glutathione S-transferase-related protein; COG0625 Glutathione S-transferase.
  
     0.618
KYG_11614
Hypothetical protein; COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
  
     0.607
KYG_14593
Putative general secretory pathway N transmembrane protein.
  
     0.590
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.