STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_00415Hypothetical protein. (193 aa)    
Predicted Functional Partners:
KYG_00410
Hypothetical protein.
 
     0.895
KYG_00395
Hypothetical protein.
 
     0.779
KYG_00420
Membrane protein.
 
     0.752
KYG_01912
Hypothetical protein.
  
     0.695
KYG_14603
General secretion pathway L.
  
     0.627
KYG_21104
Hypothetical protein.
  
     0.584
KYG_07840
ZipA protein.
  
     0.552
KYG_00450
MltA-interacting MipA family protein; COG3713 Outer membrane protein V.
  
     0.523
KYG_00400
Alpha/beta hydrolase fold protein; COG2267 Lysophospholipase.
 
     0.518
KYG_14623
General secretion pathway protein H.
  
     0.513
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.