STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_00527Integrin alpha beta-propellor repeat-containing protein. (48 aa)    
Predicted Functional Partners:
KYG_11549
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
 
 0.863
KYG_15650
COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.853
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.777
KYG_06069
COG3170 Tfp pilus assembly protein FimV.
    
 
 0.722
KYG_03536
COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
  
   0.709
KYG_17587
COG4206 Outer membrane cobalamin receptor protein.
    
 
 0.599
KYG_07351
Hypothetical protein.
   
 0.591
KYG_03034
Hypothetical protein.
  
 0.556
KYG_10575
Hypothetical protein.
  
 0.556
KYG_12956
Hypothetical protein.
  
 0.556
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.